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Beyond CNV: leveraging SNP microarrays in cancer

  • Resource type: Customer presentation
  • Application: Solid tumour

Dr. Stephen Moore will share his experience utilising OGT's CytoSure® chromosomal microarrays in various tumour types. Specifically, he will highlight the different applications of the single nucleotide polymorphism (SNP) track beyond oligonucleotides confirmation.

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Exon-focused targeted oligonucleotide microarray design increases detection of clinically relevant variants across multiple NHS genomic centres

  • Resource type: White paper
  • Application: Cytogenetics & rare disease

This white paper, first published in Genomic Medicine, demonstrates that OGT’s CytoSure Constitutional v3 array, with an enhanced targeted exon-level resolution design, offered a significant increase in reporting rate (4.49%) for developmental disorder (DD) research, compared to traditional arrays.

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The impact of microarray probe design on detecting copy number variants at exon-resolution

  • Resource type: Application note
  • Application: Haematology, Solid tumour, Cytogenetics & rare disease

CytoSure arrays offer robust copy-number detection with high resolution – detecting CNVs of a few hundred base pairs at the single-exon level. However, a number of different factors need to be taken into account when designing microarrays to make sure that they offer robust performance across the targeted regions. Learn more about the process that we undertake to make sure our arrays perform the best they possibly can.

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The use of the InnoScan 710 scanner and Mapix software with CytoSure microarrays

  • Resource type: Application note
  • Application: Haematology, Solid tumour, Cytogenetics & rare disease

This application note illustrates the use of the InnoScan 710 scanner and Mapix with a range of OGT CytoSure cytogenetic array formats.

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The whole exome: Completing the genomic picture using exon-targeted aCGH

  • Resource type: Customer presentation
  • Application: Cytogenetics & rare disease

Lora Bean provides valuable insights into the use of microarrays and NGS in parallel for CNV detection. While CNV calls from NGS data are becoming increasingly popular, they must be confirmed due to the significant false positive rate associated with them.

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Superior detection of chromosomal aberrations using the latest generation of exon-focused constitutional arrays

  • Resource type: White paper
  • Application: Cytogenetics & rare disease

This whitepaper from Dominic McMullan, West Midlands Regional Genetics Laboratory, Birmingham, UK, demonstrates that the CytoSure Constitutional v3 microarray can detect variants not detectable by other microarray platforms.

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Adoption of the CytoSure Constitutional v3 microarray for increased detection of disease-relevant variants

  • Resource type: White paper
  • Application: Cytogenetics & rare disease

In this white paper, Kris Van Den Bogaert describes how the most current microarray technology is set to increase the detection of disease-relevant variants following a validation and implementation programme at the Department of Human Genetics, University Hospitals Leuven, Belgium.

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Advancing genomic interpretation: combining NGS and microarrays

  • Resource type: Customer presentation
  • Application: Cytogenetics & rare disease

Madhuri Hegde expands on her work with OGT combining NGS, microarrays — including OGT’s CytoSure® Disease-Focused Research arrays — and an all-inclusive genomic data interpretation platform for comprehensive analysis of genetic disorders.

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Implementation of the CytoSure Constitutional v3 microarray in the UK NHS

  • Resource type: Customer presentation
  • Application: Cytogenetics & rare disease

Dom McMullan discusses the implementation of the CytoSure® Constitutional v3 microarray in the NHS laboratory, and how it facilitated cost-effective, evidence-based analysis of large populations.

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Validation of the CytoSure Constitutional v3 microarrays in prenatal and postnatal analysis

  • Resource type: Customer presentation
  • Application: Cytogenetics & rare disease

Kris Van Den Bogaert discusses the evaluation of the CytoSure® Constitutional v3 microarrays in prenatal and postnatal research.

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Customisable, exon-focused aCGH microarrays complement NGS for additional insights into genetic disorders

  • Resource type: Customer presentation
  • Application: Cytogenetics & rare disease

Dr Tracey Lewis delves into the benefits of combining the study of copy number variations (CNVs) and single nucleotide variations (SNVs) for enhanced mutation detection across a range of genetic conditions.

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Examining the medical exome

  • Resource type: White paper
  • Application: Cytogenetics & rare disease

In this white paper, genetic scientists Dr Tracey Lewis and Dr Emily Farrow discuss how customisable, exon focused array designs complement next generation sequencing (NGS) for clinical genetic research.

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